Under the orders of the ruthless Templar Qiu Ju, the port of Macau is set aflame. Wracked with guilt, Shao Jun retreats to the countryside… Meanwhile, in modern day Yokohama, Lisa is approached by a man who warns her of a dire side effect of using the Animus. But after witnessing more and more events from Shao Jun’s past, Lisa is beginning to relate to the motivations of her ancestor. Even the terrifying side effects are unable to stop her from satisfying her curiosity…